Ecosystems, according to the website, are "integrated systems of organisms interacting with their physical environments," and the USGS (U.S. Geological Survey) "conducts research and monitoring to develop and convey a fundamental understanding of ecosystem function and distributions."
Major sub-topics of particular interest regarding wildlife are:
Wildlife: Terrestrial and Endangered Resources Program
Fisheries: Aquatic and Endangered Resources Program
Genetics and Genomics
Invasive Species Program
Status and Trends Program